PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM10G09710.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 329aa    MW: 36050.6 Da    PI: 4.7889
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM10G09710.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM57.74.1e-18111363127
              NAM   3 pGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpkkvka.eekew..yfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                      +G+rF P+d el+   L +k++g++  ++e ++++++i++++P +L +++++ ee+e   yfFs+ + +    k  +ra++ g+Wk     +++
  OGLUM10G09710.1  11 VGVRFLPKDLELL-GILDAKLRGSPlGPVEAIFHDTQILDFHPYKLYEMYAEdEEEEGyiYFFSTMQFRC--RKIVERAAQGGRWKVNNC-ETL 100
                      7************.67*********54555569*************743333133333347777776665..57899*********7655.344 PP

              NAM  93 lskkgelvglkktLvfyk..grapkgektdWvmheyr 127
                       + +g +vg k t+ fy+  g +++   t+W m+e++
  OGLUM10G09710.1 101 EV-GGVAVGRKFTMNFYEhiGGDNDLIWTNWGMQEFT 136
                      44.89************5336788889********97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.62E-266156IPR003441NAC domain
PROSITE profilePS5100521.2899156IPR003441NAC domain
PfamPF023653.8E-1011136IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
MAAPEGQNKF VGVRFLPKDL ELLGILDAKL RGSPLGPVEA IFHDTQILDF HPYKLYEMYA  60
EDEEEEGYIY FFSTMQFRCR KIVERAAQGG RWKVNNCETL EVGGVAVGRK FTMNFYEHIG  120
GDNDLIWTNW GMQEFTRIIG PNKEFADLAV YRLYKKKITR GNGEEKPEDI AAASDGDTES  180
SMNKRRRVEA SAAAMALPPP PPPGTMMFMA DQANVASTSP LPQEWHGQFA NSAAAAPSPS  240
GCWPWAPPPT PSAVEPFSFW ASASAAIPPA ADHYHPPPPP QGGEYYSRHG AFSVAPVPAS  300
ACSTSPLPAA GTEGSYSQQQ EPPCELMEF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1183187KRRRV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1109420.0AK110942.1 Oryza sativa Japonica Group cDNA clone:002-173-H02, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015613929.10.0PREDICTED: uncharacterized protein LOC4348617
TrEMBLA0A0E0BAH00.0A0A0E0BAH0_9ORYZ; Uncharacterized protein
STRINGORGLA10G0084900.10.0(Oryza glaberrima)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1920699